US Veterans Health Administration FHIR Map Set Implementation Guide
1.9.0 - 251001 United States of America flag

US Veterans Health Administration FHIR Map Set Implementation Guide - Downloaded Version 1.9.0 See the Directory of published versions

Resource Profile: MicrobiologyMycobacteriologySpecimen - Mappings

Active as of 2025-09-30

Mappings for the MicrobiologyMycobacteriologySpecimen resource profile.

Scroll down for the Raw FHIR, CDW & SDA mappings (if any).

Note that the CDW, SDA and VPR XML mappings are derived from a look-up based on the VistA source.

Mapping Sources

Use Case: Microbiology: Mycobacteriology (Source)Use Case: Microbiology: Mycobacteriology (Source)LABORATORY TEST (60)100SITE/SPECIMENCOLLECTION SAMPLE (62).01NAMEMICROBIOLOGY (63.05).001IEN.01DATE/TIME SPECIMEN TAKEN.055COLLECTION SAMPLE.06MICROBIOLOGY ACCESSION.35ORDERED TEST23TB RPT STATUSORDERED TEST (63.5)13LAB TEST ORDEREDSITE/SPECIMEN (60.01)95.3LOINC CODELAB LOINC (95.3)[NULL][NULL][NULL]

Raw Mappings

key status direction source mapApproach mapCase FHIR Path subPath mapValue mapParameter mapComment FHIR URL | Ver
1469 for review V2F MICROBIOLOGY - MICROBIOLOGY ACCESSION (63.05-.06) source value Specimen.accessionIdentifier http://hl7.org/fhir/StructureDefinition/Specimen | 4.0.1
1470 for review V2F MICROBIOLOGY - COLLECTION SAMPLE > COLLECTION SAMPLE - NAME (63.05-.055 > 62-.01) source value Specimen.type.text http://hl7.org/fhir/StructureDefinition/Specimen | 4.0.1

Mappings to Structures in this Implementation Guide

No Mappings Found

Mappings to other Structures

No Mappings Found

Other Mappings

NameVeterans Health Information Systems Technology and Architecture (VistA)Clinical Data Warehouse (CDW)Summary Document Architecure (SDA)doco
.. Specimen
... id
... meta
... implicitRules
... text
... contained
... extension
... modifierExtension
... identifier
... accessionIdentifier
source value based on MICROBIOLOGY - MICROBIOLOGY ACCESSION (63.05-.06)
Micro.Microbiology.MicrobiologyAccession
LabOrder.Extension[ResultExtension].GroupName
... status
... type
.... id
.... extension
.... coding
.... text
source value based on MICROBIOLOGY - COLLECTION SAMPLE > COLLECTION SAMPLE - NAME (63.05-.055 > 62-.01)
Micro.Microbiology.CollectionSampleIEN Dim.CollectionSample.CollectionSample Dim.Topography.CollectionSample
... subject
... receivedTime
... parent
... request
... collection
.... id
.... extension
.... modifierExtension
.... collector
.... collected[x]
.... duration
.... quantity
.... method
.... bodySite
.... fastingStatus[x]
... processing
.... id
.... extension
.... modifierExtension
.... description
.... procedure
.... additive
.... time[x]
... container
.... id
.... extension
.... modifierExtension
.... identifier
.... description
.... type
.... capacity
.... specimenQuantity
.... additive[x]
... condition
... note

doco Documentation for this format